BAITS.VDJ.tl.filter_clones_spatial

BAITS.VDJ.tl.filter_clones_spatial#

BAITS.VDJ.tl.filter_clones_spatial(df, clone_spatial_col, min_clone_spatial=1)#

Filter dataframe by minimum spatial clone count.

Parameters:

  • df (pandas.DataFrame) – Input dataframe.

  • clone_spatial_col (str) – Column containing spatial clone counts.

  • min_clone_spatial (int, default=1) – Minimum count to retain.

Returns:

Filtered dataframe.

Return type:

pandas.DataFrame

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