BAITS.st.pl.clustering_results

BAITS.st.pl.clustering_results#

BAITS.st.pl.clustering_results(adata, cluster_column, color_dict, spot_size, plot=True)#

Plots the clustering results, displaying the cluster labels for each data point using the specified colors.

Parameters:

  • adata (AnnData object) – containing spatial information and clustering labels.

  • cluster_column (-) – the name of the column containing the cluster labels.(eg. the name of the column in use_rep in cluster_Auto_k)

  • color_dict (-) – a dictionary specifying the color for each cluster label (optional).

  • spot_size (-) – the size of the data points (default is 50).

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